BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB003D04LP1|AL425110
(994 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig809 1914 0.0
>3x_Contig809
Length = 3151
Score = 1914 bits (965), Expect = 0.0
Identities = 986/991 (99%), Gaps = 2/991 (0%)
Strand = Plus / Minus
Query: 6 gatcccttgctcttgtattctctatctttaccactcattcgatgagatgacaaaagcttt 65
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3132 gatcccttgctcttgtattctctatctttaccactcattcgatgagatgacaaaagcttt 3073
Query: 66 aaattaagatttatttcttttattcgctattgagatgatatgagccaagaggaggagaaa 125
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 3072 aaattaagatttatttcttttattcgctattgagatgatatgagcaaagaggaggagaaa 3013
Query: 126 gctaaacaagggaagcatgacgaggtctaaagccttctcgtaataggatataatatcatt 185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3012 gctaaacaagggaagcatgacgaggtctaaagccttctcgtaataggatataatatcatt 2953
Query: 186 gctgtatacttaaatactcttacatatatgttttgatcacgagtataatttgagcactct 245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2952 gctgtatacttaaatactcttacatatatgttttgatcacgagtataatttgagcactct 2893
Query: 246 atcctcaatattgtccaggacagaaatgtgttggaaaaccgtgatatcgtttgccaatgc 305
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2892 atcctcaatattgtccaggacagaaatgtgttggaaaaccgtgatatcgtttgccaatgc 2833
Query: 306 cttcatttggtccttaggatttggtccaccgggactttgacttaattgctgttgttgagc 365
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2832 cttcatttggtccttaggatttggtccaccgggactttgacttaattgctgttgttgagc 2773
Query: 366 cgacacatttaatttactgagtctattaccaccgaatagaacgttataaactggtgtcaa 425
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2772 cgacacatttaatttactgagtctattaccaccgaatagaacgttataaactggtgtcaa 2713
Query: 426 accacccattgaaatgatataccatgacatactactcacccagcgtacgtctaaatcatc 485
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2712 accacccattgaaatgatataccatgacatactactcacccagcgtacgtctaaatcatc 2653
Query: 486 agttctgactgaactttgtagcatttgcttgaatctaatggtaagtgggaatggaagctt 545
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2652 agttctgactgaactttgtagcatttgcttgaatctaatggtaagtgggaatggaagctt 2593
Query: 546 cattaatacgaatcctgcaaagaagttattgacccaccacattataactgtttgaggaat 605
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 2592 cattaatacgaatcctgcaaagaagtaattgacccaccacattataactgtttgaggaat 2533
Query: 606 atagttaaccaaattccccaaagccatggaagtcattgcgtcggtcataccgggacttgt 665
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2532 atagttaaccaaattccccaaagccatggaagtcattgcgtcggtcataccgggacttgt 2473
Query: 666 gaaagggttttccatcgccgtcttttcatctttagctggcttgattgccaggtatttccc 725
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2472 gaaagggttttccatcgccgtcttttcatctttagctggcttgattgccaggtatttccc 2413
Query: 726 atcagctagcacttgcgctaaatattcctgcctcatcttaaatgattctgtactcaaatt 785
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2412 atcagctagcacttgcgctaaatattcctgcctcatcttaaatgattctgtactcaaatt 2353
Query: 786 cgaactattccccattaatgctctagccttagctatgtataggatctcagtgagttttac 845
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2352 cgaactattccccattaatgctctagccttagctatgtataggatctcagtgagttttac 2293
Query: 846 gcgaggtactgtcttagacttagggctcacaagaaccatgatacattgtttcgctacccc 905
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2292 gcgaggtactgtcttagacttagggctcacaagaaccatgatacattgtttcgctacccc 2233
Query: 906 tacgaggatcatgacgatggagatgggtattagtgcccataacttcagattcgggtctag 965
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2232 tacgaggatcatgacgatggagatgggtattagtgcccataacttcagattcgggtctag 2173
Query: 966 c-aaagttccgg-ccctcatttyctgttcgt 994
| |||||||||| ||||||||| ||||||||
Sbjct: 2172 caaaagttccggcccctcatttcctgttcgt 2142
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6516
Number of Sequences: 1807
Number of extensions: 6516
Number of successful extensions: 44
Number of sequences better than 1.0e-20: 1
length of query: 994
length of database: 10,358,551
effective HSP length: 16
effective length of query: 978
effective length of database: 10,329,639
effective search space: 10102386942
effective search space used: 10102386942
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)